# filelist

dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/serial/impl
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filenames:
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dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/connect/services
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filenames:
  blob_storage_netcache.hpp/clparser.hpp/compound_id.hpp/error_codes.hpp/grid_client.hpp/grid_client_app.hpp/grid_globals.hpp/grid_rw_impl.hpp/grid_worker.hpp/grid_worker_app.hpp/impl/json_over_uttp.hpp/named_parameters.hpp/netcache_admin.hpp/netcache_api.hpp/netcache_api_expt.hpp/netcache_key.hpp/netcache_search.hpp/netcomponent.hpp/neticache_client.hpp/netschedule_api.hpp/netschedule_api_expt.hpp/netschedule_key.hpp/netservice_api.hpp/netservice_api_expt.hpp/netservice_protocol_parser.hpp/netstorage.hpp/netstorage_ft.hpp/ns_client_factory.hpp/ns_job_serializer.hpp/ns_output_parser.hpp/remote_app.hpp/srv_connections.hpp/srv_connections_expt.hpp/util.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objects/insdseq
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filenames:
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dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/objects/trackmgr
filenames:
  TMgr_ACL_AccessLevel_.hpp/TMgr_AnnotCounts.hpp/TMgr_AnnotCounts_.hpp/TMgr_AnnotType_.hpp/TMgr_Assembly.hpp/TMgr_AssemblySpec.hpp/TMgr_AssemblySpec_.hpp/TMgr_Assembly_.hpp/TMgr_AttrReply.hpp/TMgr_AttrReply_.hpp/TMgr_AttrRequest.hpp/TMgr_AttrRequest_.hpp/TMgr_AttrSpec.hpp/TMgr_AttrSpec_.hpp/TMgr_AttrValueReply.hpp/TMgr_AttrValueReply_.hpp/TMgr_Attribute.hpp/TMgr_Attribute_.hpp/TMgr_BlastQuerySeq.hpp/TMgr_BlastQuerySeq_.hpp/TMgr_BlastRIDDetail.hpp/TMgr_BlastRIDDetail_.hpp/TMgr_BlastRIDReply.hpp/TMgr_BlastRIDReply_.hpp/TMgr_BlastRIDRequest.hpp/TMgr_BlastRIDRequest_.hpp/TMgr_ClientInfo.hpp/TMgr_ClientInfo_.hpp/TMgr_CreateRemoteTrackRepl.hpp/TMgr_CreateRemoteTrackRepl_.hpp/TMgr_CreateRemoteTrackRequ.hpp/TMgr_CreateRemoteTrackRequ_.hpp/TMgr_CreateTracksetReply.hpp/TMgr_CreateTracksetReply_.hpp/TMgr_CreateTracksetRequest.hpp/TMgr_CreateTracksetRequest_.hpp/TMgr_CreateUserDataItem.hpp/TMgr_CreateUserDataItem_.hpp/TMgr_CreateUserTrackReply.hpp/TMgr_CreateUserTrackReply_.hpp/TMgr_CreateUserTrackReques.hpp/TMgr_CreateUserTrackReques_.hpp/TMgr_DHubId.hpp/TMgr_DHubId_.hpp/TMgr_DTrackId.hpp/TMgr_DTrackId_.hpp/TMgr_DatasetItem.hpp/TMgr_DatasetItemSeq.hpp/TMgr_DatasetItemSeq_.hpp/TMgr_DatasetItem_.hpp/TMgr_DisplayTrack.hpp/TMgr_DisplayTrackChoice.hpp/TMgr_DisplayTrackChoice_.hpp/TMgr_DisplayTrackReply.hpp/TMgr_DisplayTrackReply_.hpp/TMgr_DisplayTrackRequest.hpp/TMgr_DisplayTrackRequest_.hpp/TMgr_DisplayTrack_.hpp/TMgr_GenomeContext.hpp/TMgr_GenomeContext_.hpp/TMgr_Hub.hpp/TMgr_HubTrack.hpp/TMgr_HubTrack_.hpp/TMgr_Hub_.hpp/TMgr_Identity.hpp/TMgr_IdentityId.hpp/TMgr_IdentityIdType_.hpp/TMgr_IdentityId_.hpp/TMgr_Identity_.hpp/TMgr_ItemResolverReply.hpp/TMgr_ItemResolverReply_.hpp/TMgr_ItemResolverRequest.hpp/TMgr_ItemResolverRequest_.hpp/TMgr_LengthStats.hpp/TMgr_LengthStats_.hpp/TMgr_Message.hpp/TMgr_MessageLevel_.hpp/TMgr_Message_.hpp/TMgr_PositionStats.hpp/TMgr_PositionStats_.hpp/TMgr_RemoveUserTrackReply.hpp/TMgr_RemoveUserTrackReply_.hpp/TMgr_RemoveUserTrackReques.hpp/TMgr_RemoveUserTrackReques_.hpp/TMgr_RenameMyNCBICollectio.hpp/TMgr_RenameMyNCBICollectio_.hpp/TMgr_RenameMyNCBICollectix.hpp/TMgr_RenameMyNCBICollectix_.hpp/TMgr_Reply.hpp/TMgr_Reply_.hpp/TMgr_Request.hpp/TMgr_Request_.hpp/TMgr_RetrieveTracksetReply.hpp/TMgr_RetrieveTracksetReply_.hpp/TMgr_RetrieveTracksetReque.hpp/TMgr_RetrieveTracksetReque_.hpp/TMgr_SeqTrackIdReply.hpp/TMgr_SeqTrackIdReply_.hpp/TMgr_SeqTrackIdRequest.hpp/TMgr_SeqTrackIdRequest_.hpp/TMgr_Status_.hpp/TMgr_SupportedAssembliesRe.hpp/TMgr_SupportedAssembliesRe_.hpp/TMgr_SupportedAssembliesRx.hpp/TMgr_SupportedAssembliesRx_.hpp/TMgr_SwitchTrackContextRep.hpp/TMgr_SwitchTrackContextRep_.hpp/TMgr_SwitchTrackContextReq.hpp/TMgr_SwitchTrackContextReq_.hpp/TMgr_SwitchTrackException.hpp/TMgr_SwitchTrackExceptionC_.hpp/TMgr_SwitchTrackException_.hpp/TMgr_TrackACL_Authorizatio.hpp/TMgr_TrackACL_Authorizatio_.hpp/TMgr_TrackACL_Permission.hpp/TMgr_TrackACL_Permission_.hpp/TMgr_TrackAttrValueReply.hpp/TMgr_TrackAttrValueReply_.hpp/TMgr_TrackAttrValueRequest.hpp/TMgr_TrackAttrValueRequest_.hpp/TMgr_TrackAttributes.hpp/TMgr_TrackAttributes_.hpp/TMgr_TrackItems.hpp/TMgr_TrackItems_.hpp/TMgr_TrackSet.hpp/TMgr_TrackSetType_.hpp/TMgr_TrackSet_.hpp/TMgr_TypeStat.hpp/TMgr_TypeStat_.hpp/TMgr_TypeTrackType_.hpp/TMgr_ValueRequest.hpp/TMgr_ValueRequest_.hpp/trackmgr_client.hpp/trackmgr_client_.hpp

filetypes:
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dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objtools/eutils/esearch
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filenames:
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dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/objtools/align_format
filetypes: fffffffff
filenames:
  align_format_util.hpp/aln_printer.hpp/format_flags.hpp/seqalignfilter.hpp/showalign.hpp/showdefline.hpp/tabular.hpp/taxFormat.hpp/vectorscreen.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objtools/edit
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filenames:
  apply_object.cpp/autodef_with_tax.cpp/cds_fix.cpp/dblink_field.cpp/eutils_updater.cpp/external_annots.cpp/feattable_edit.cpp/feature_propagate.cpp/field_handler.cpp/gap_trim.cpp/gaps_edit.cpp/gb_block_field.cpp/gene_utils.cpp/huge_asn_loader.cpp/huge_asn_macro_reader.cpp/huge_asn_reader.cpp/huge_file.cpp/huge_file_process.cpp/link_cds_mrna.cpp/loc_edit.cpp/mail_report.cpp/mla_updater.cpp/parse_text_options.cpp/promote.cpp/pub_fix.cpp/pub_fix_aux.hpp/publication_edit.cpp/remote_updater.cpp/rna_edit.cpp/seq_edit.cpp/seq_entry_edit.cpp/seqid_guesser.cpp/source_edit.cpp/string_constraint.cpp/struc_comm_field.cpp/text_desc_field.cpp/text_object_description.cpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objects/featdef
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filenames:
  FeatDef.cpp/FeatDefGroupSet.cpp/FeatDefGroupSet_.cpp/FeatDefSet.cpp/FeatDefSet_.cpp/FeatDef_.cpp/FeatDispGroup.cpp/FeatDispGroupSet.cpp/FeatDispGroupSet_.cpp/FeatDispGroup_.cpp/FeatMolType.cpp/FeatMolType_.cpp/NCBI_FeatDef_module.cpp/featdef__.cpp/featdef___.cpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/objects/submit
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filenames:
  Contact_info.hpp/Contact_info_.hpp/Seq_submit.hpp/Seq_submit_.hpp/Submit_block.hpp/Submit_block_.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/util/sequtil
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filenames:
  sequtil.cpp/sequtil_convert.cpp/sequtil_convert_imp.cpp/sequtil_convert_imp.hpp/sequtil_manip.cpp/sequtil_shared.cpp/sequtil_shared.hpp/sequtil_tables.cpp/sequtil_tables.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/objects/varrep
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filenames:
  AaInterval.hpp/AaInterval_.hpp/AaLocation.hpp/AaLocation_.hpp/AaSite.hpp/AaSiteRange.hpp/AaSiteRange_.hpp/AaSite_.hpp/Conversion.hpp/Conversion_.hpp/Count.hpp/Count_.hpp/CtermExtension.hpp/CtermExtension_.hpp/Deletion.hpp/Deletion_.hpp/Delins.hpp/Delins_.hpp/Duplication.hpp/Duplication_.hpp/Frameshift.hpp/Frameshift_.hpp/Insertion.hpp/Insertion_.hpp/Inversion.hpp/Inversion_.hpp/NaIdentity.hpp/NaIdentity_.hpp/NaSub.hpp/NaSub_.hpp/NtIntLimit.hpp/NtIntLimit_.hpp/NtInterval.hpp/NtInterval_.hpp/NtLocation.hpp/NtLocation_.hpp/NtSite.hpp/NtSiteRange.hpp/NtSiteRange_.hpp/NtSite_.hpp/NtermExtension.hpp/NtermExtension_.hpp/ProteinExtension.hpp/ProteinExtension_.hpp/ProteinSub.hpp/ProteinSub_.hpp/Repeat.hpp/Repeat_.hpp/SeqInterval.hpp/SeqInterval_.hpp/SeqLocation.hpp/SeqLocation_.hpp/SequenceVariant.hpp/SequenceVariant_.hpp/SimpleVariant.hpp/SimpleVariantSeq.hpp/SimpleVariantSeq_.hpp/SimpleVariant_.hpp/SpecialVariant_.hpp/Subsequence.hpp/Subsequence_.hpp/Variant.hpp/VariantExpression.hpp/VariantExpression_.hpp/VariantSeqType_.hpp/Variant_.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/html
filetypes: ffffffffffffffff
filenames:
  commentdiag.hpp/components.hpp/components.inl/error_codes.hpp/html.hpp/html.inl/html_exception.hpp/htmlhelper.hpp/indentstream.hpp/node.hpp/node.inl/nodemap.hpp/page.hpp/pager.hpp/selection.hpp/writer_htmlenc.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objtools/readers
filenames:
  acc_pattern.cpp/agp_converter.cpp/agp_read.cpp/agp_seq_entry.cpp/agp_util.cpp/agp_validate_reader.cpp/aln_error_reporter.cpp/aln_errors.cpp/aln_errors.hpp/aln_formatguess.cpp/aln_formatguess.hpp/aln_formats.cpp/aln_peek_ahead.hpp/aln_reader.cpp/aln_scanner.cpp/aln_scanner.hpp/aln_scanner_clustal.cpp/aln_scanner_clustal.hpp/aln_scanner_fastagap.cpp/aln_scanner_fastagap.hpp/aln_scanner_multalign.cpp/aln_scanner_multalign.hpp/aln_scanner_nexus.cpp/aln_scanner_nexus.hpp/aln_scanner_phylip.cpp/aln_scanner_phylip.hpp/aln_scanner_sequin.cpp/aln_scanner_sequin.hpp/aln_util.cpp/aln_util.hpp/alnread.cpp/bed_autosql.cpp/bed_autosql.hpp/bed_autosql_custom.cpp/bed_autosql_custom.hpp/bed_autosql_standard.cpp/bed_autosql_standard.hpp/bed_column_data.cpp/bed_column_data.hpp/bed_reader.cpp/best_feat_finder.cpp/best_feat_finder.hpp/cigar.cpp/descr_mod_apply.cpp/descr_mod_apply.hpp/fasta.cpp/fasta_aln_builder.cpp/fasta_aln_builder.hpp/fasta_exception.cpp/fasta_reader_utils.cpp/feature_mod_apply.cpp/feature_mod_apply.hpp/format_guess_ex.cpp/getfeature.cpp/gff2_data.cpp/gff2_reader.cpp/gff3_location_merger.cpp/gff3_reader.cpp/gff_base_columns.cpp/glimmer_reader.cpp/gtf_location_merger.cpp/gtf_location_merger.hpp/gtf_reader.cpp/gvf_reader.cpp/idmapper.cpp/idmapper_builtin.cpp/idmapper_builtin_config.inl/idmapper_config.cpp/idmapper_database.cpp/idmapper_gcassembly.cpp/idmapper_scope.cpp/line_error.cpp/message_listener.cpp/microarray_reader.cpp/mod_error.cpp/mod_reader.cpp/mod_to_enum.cpp/mod_to_enum.hpp/phrap.cpp/psl_data.cpp/psl_data.hpp/psl_reader.cpp/read_util.cpp/reader_base.cpp/reader_data.cpp/reader_data.hpp/reader_listener.cpp/reader_message.cpp/reader_message_handler.cpp/reader_message_handler.hpp/readfeat.cpp/rm_reader.cpp/seqid_validate.cpp/source_mod_parser.cpp/source_mod_parser_wrapper.cpp/struct_cmt_reader.cpp/track_data.cpp/ucscregion_reader.cpp/vcf_reader.cpp/wiggle_reader.cpp

filetypes:
[cell repeats an earlier one in this file: 100 characters]


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/objtools/format/items
filetypes: fffffffffffffffffffffffffffffff
filenames:
  accession_item.hpp/alignment_item.hpp/basecount_item.hpp/comment_item.hpp/contig_item.hpp/ctrl_items.hpp/date_item.hpp/dbsource_item.hpp/defline_item.hpp/feature_item.hpp/flat_qual_slots.hpp/flat_seqloc.hpp/gap_item.hpp/gene_finder.hpp/genome_item.hpp/genome_project_item.hpp/html_anchor_item.hpp/item.hpp/item_base.hpp/keywords_item.hpp/locus_item.hpp/origin_item.hpp/primary_item.hpp/qualifiers.hpp/reference_item.hpp/segment_item.hpp/sequence_item.hpp/source_item.hpp/tsa_item.hpp/version_item.hpp/wgs_item.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/objtools/blast/seqdb_reader
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filenames:
  seqdb.cpp/seqdb_lmdb.cpp/seqdbalias.cpp/seqdbalias.hpp/seqdbatlas.cpp/seqdbbitset.cpp/seqdbbitset.hpp/seqdbblob.cpp/seqdbcol.cpp/seqdbcommon.cpp/seqdbexpert.cpp/seqdbfile.cpp/seqdbfilter.cpp/seqdbfilter.hpp/seqdbgilistset.cpp/seqdbgilistset.hpp/seqdbgimask.cpp/seqdbgimask.hpp/seqdbimpl.cpp/seqdbimpl.hpp/seqdbisam.cpp/seqdblmdbset.cpp/seqdblmdbset.hpp/seqdbobj.cpp/seqdboidlist.cpp/seqdboidlist.hpp/seqdbtax.cpp/seqdbvol.cpp/seqdbvolset.cpp/seqdbvolset.hpp/seqidlist_reader.cpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/include/corelib/impl
filetypes: fffffff
filenames:
  listener_stack.hpp/ncbi_atomic_defs.h/ncbi_dbsvcmapper.hpp/ncbi_panfs.h/ncbi_param_impl.hpp/rwstreambuf.hpp/stringutf8_deprecated.hpp


dirname: /usr/src/debug/ncbi-blast-2.14.0-3.oe2509.x86_64/c++/src/serial
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filenames:
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dirname: /usr/src/debug/ncdu-1.15.1-1.oe2509.x86_64/src
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dirname: /usr/lib/debug/usr/bin
filetypes: fffffffff
filenames:
  caffe2ncnn-20240820-1.oe2509.x86_64.debug/darknet2ncnn-20240820-1.oe2509.x86_64.debug/mxnet2ncnn-20240820-1.oe2509.x86_64.debug/ncnn2int8-20240820-1.oe2509.x86_64.debug/ncnn2mem-20240820-1.oe2509.x86_64.debug/ncnn2table-20240820-1.oe2509.x86_64.debug/ncnnmerge-20240820-1.oe2509.x86_64.debug/ncnnoptimize-20240820-1.oe2509.x86_64.debug/onnx2ncnn-20240820-1.oe2509.x86_64.debug


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